Advanced course on Design and analysis of multi-environment trials: conventional and QTL-based methods
Zaragoza, Spain
12-23 September 2005
This course was intended to provide breeders, geneticists, applied statisticians and other crop specialists involved in designing and analysing field experiments, with working knowledge on different statistical tools for the multi-environment trials (METs) analysis. To achieve this objective, the course was focused on how to:
- Design METs.
- Analyse and interpret GxE in METs.
- Perform QTL analyses in a MET context.
- Use appropriate software for the analysis of METs.
- Develop breeding strategies and achieve a better prediction of genotypic responses from quantitative analyses of MET data.
The course was organized by the Mediterranean Agronomic Institute of Zaragoza (IAMZ) of the International Centre for Advanced Mediterranean Agronomic Studies (CIHEAM), in collaboration with the Generation Challenge Programme.
The following PDF documents are copies of notes and power point presentations that were delivered by the lecturers of the course and some related publications. Individuals may freely print materials for educational or other non-commercial purposes without prior permission. Acknowledgement of the source of the materials is required. Other uses require prior permission from the course organizers and lecturers.
- Course information
- Programme
- Agenda
- Lecturers
- Participants-list
- Participants-addresses
- Participants-individual photos
- Group photograph
- Information leaflet
- Training materials
- Breeding concepts (Ignacio Romagosa)
- Design of individual breeding trials (Emlyn Williams)
- Analysis of individual breeding trials (Hans Peter Piepho)
- Spatial models (Roger Payne)
- Bilinear models, pattern analysis and selection theory
- Targeting genotypes based on responses to locations and yield stability (Paolo Annichiarico)
- Definition of adaptations strategies and yield stability targets--Computer-aided applications (Paolo Annichiarico and Luigi Russi)
- Modelling adaptive responses and cultivar recommendations--Computer-aided applications (Paolo Annichiarico and Luigi Russi)
- Mixed models analysis (Fred van Eeuwijk)
- Factorial analysis
- PowerPoint presentation (Fred van Eeuwijk)
- Paper (text) (F.A. van Eeuwijk, J.-B. Denis & M.S. Kang, 1996)
- Paper (tables) (F.A. van Eeuwijk, J.-B. Denis & M.S. Kang, 1996)
- Paper (J. Voltas et al., 2002)
- QTL analysis
- Lecture notes on linkage analysis (Piet Stam)
- Lecture notes on construction of genetic linkage maps (Piet Stam)
- PowerPoint presentation: Generalizing QTL mapping: LD mapping (Fred van Eeuwijk and Marcos Malosetti)
- PowerPoint presentation: Creation of genetic predictors for QTL mapping (Fred van Eeuwijk)
- PowerPoint presentation: Modeling GxE and QTLxE within a mixed model framework (Fred van Eeuwijk, Marcos Malosetti and Martin Boer)
- Paper (Fred van Eeuwijk et al., 2005)
- Molecular assisted selection (Jess Moreno)